PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009800610.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 130aa    MW: 14838.4 Da    PI: 5.334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009800610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.6e-201567256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd  +++    r++lg+f taeeAa+a+++a+ +++g+
  XP_009800610.1 15 KYRGVRKRP-WGKFAAEIRDtSRQG--GVRVWLGTFTTAEEAARAYDKAAYSMRGN 67
                    8********.**********44334..4*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.2E-301576IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-211575IPR016177DNA-binding domain
PROSITE profilePS5103223.2221574IPR001471AP2/ERF domain
SMARTSM003804.0E-321580IPR001471AP2/ERF domain
CDDcd000181.05E-271575No hitNo description
PfamPF008477.0E-141566IPR001471AP2/ERF domain
PRINTSPR003671.8E-111627IPR001471AP2/ERF domain
PRINTSPR003671.8E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MDERGKIKDN TEEVKYRGVR KRPWGKFAAE IRDTSRQGGV RVWLGTFTTA EEAARAYDKA  60
AYSMRGNLAI LNFPEEYNLP SSSSHFNTGS SSMASSSVQE RNEQVLELEY LDDKLLEELL  120
DCDEHANKRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-251678667ATERF1
2gcc_A2e-251678667ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009800610.11e-93PREDICTED: ethylene-responsive transcription factor ERF096-like
RefseqXP_016432386.11e-93PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC53e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLK4BDX46e-62K4BDX4_SOLLC; Uncharacterized protein
STRINGSolyc03g005500.1.12e-61(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.13e-24ERF family protein